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how to calculate distance between two clusters. The distance between two clusters is the mean distance between an observation or variable in one cluster and an observation or variable in the other cluster. So the larger the distance between two clusters the better it is.
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Average Linkage Distance. Below I have shown the calculation of distance from initial centroids D2 and D4 from data point D1. The exact distance is the minimum Euclidean distance taken over all pairs of points P1-P2 where P1 is taken from cluster C1 and P2 is taken from cluster C2.
Endgroup Talen Kylon Apr 21 16 at 1452 1 begingroup You should ask yourself why you want to compute it to figure out what it is that you need to compute.
It is also known as Single Linkage. Say I have two clusters A and B with mean m a and m b respectively. Begingroup par the manhattan distance between the two clusters. Defines the distance between two clusters c1 and c2 as the minimal distance between any two points x y with x in c1 and y in c2.
